Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL11A1P12107 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.97■□□□□ 0.47
COL11A1P12107 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 MIR1247-201ENST00000408206 136 ntBASIC17.97■□□□□ 0.47
COL11A1P12107 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 ZNF767P-206ENST00000513792 565 ntBASIC17.97■□□□□ 0.47
COL11A1P12107 RNA5SP412-201ENST00000516234 123 ntBASIC17.97■□□□□ 0.47
COL11A1P12107 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
COL11A1P12107 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.97■□□□□ 0.47
COL11A1P12107 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.97■□□□□ 0.47
COL11A1P12107 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL11A1P12107 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
COL11A1P12107 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL11A1P12107 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL11A1P12107 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.96■□□□□ 0.47
COL11A1P12107 AL590640.2-201ENST00000457038 527 ntBASIC17.96■□□□□ 0.47
COL11A1P12107 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL11A1P12107 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.96■□□□□ 0.47
COL11A1P12107 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL11A1P12107 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.96■□□□□ 0.47
COL11A1P12107 RN7SL560P-201ENST00000577943 264 ntBASIC17.96■□□□□ 0.47
COL11A1P12107 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.96■□□□□ 0.47
COL11A1P12107 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.96■□□□□ 0.47
COL11A1P12107 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.96■□□□□ 0.47
COL11A1P12107 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
COL11A1P12107 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL11A1P12107 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL11A1P12107 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 BCYRN1-201ENST00000418539 200 ntBASIC17.95■□□□□ 0.46
COL11A1P12107 AP001582.1-201ENST00000525856 295 ntBASIC17.95■□□□□ 0.46
COL11A1P12107 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 AC026954.1-201ENST00000429771 1293 ntBASIC17.95■□□□□ 0.46
COL11A1P12107 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL11A1P12107 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.95■□□□□ 0.46
COL11A1P12107 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.95■□□□□ 0.46
COL11A1P12107 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.95■□□□□ 0.46
COL11A1P12107 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.95■□□□□ 0.46
COL11A1P12107 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL11A1P12107 MIR4313-201ENST00000580760 101 ntBASIC17.95■□□□□ 0.46
COL11A1P12107 MIR6799-201ENST00000620297 69 ntBASIC17.95■□□□□ 0.46
COL11A1P12107 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms