Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.92■□□□□ 0.62
TOP1P11387 AC092364.2-202ENST00000597012 1073 ntBASIC18.92■□□□□ 0.62
TOP1P11387 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TOP1P11387 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.92■□□□□ 0.62
TOP1P11387 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 AL513523.2-202ENST00000427283 2040 ntBASIC18.91■□□□□ 0.62
TOP1P11387 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.91■□□□□ 0.62
TOP1P11387 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.91■□□□□ 0.62
TOP1P11387 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TOP1P11387 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.91■□□□□ 0.62
TOP1P11387 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 SPDYE17-201ENST00000412399 783 ntBASIC18.91■□□□□ 0.62
TOP1P11387 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.91■□□□□ 0.62
TOP1P11387 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.91■□□□□ 0.62
TOP1P11387 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.91■□□□□ 0.62
TOP1P11387 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.91■□□□□ 0.62
TOP1P11387 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.91■□□□□ 0.62
TOP1P11387 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TOP1P11387 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
TOP1P11387 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.91■□□□□ 0.62
TOP1P11387 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TOP1P11387 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TOP1P11387 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.9■□□□□ 0.62
TOP1P11387 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.9■□□□□ 0.62
TOP1P11387 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.9■□□□□ 0.62
TOP1P11387 KRT8P12-202ENST00000472924 1397 ntBASIC18.9■□□□□ 0.62
TOP1P11387 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TOP1P11387 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.9■□□□□ 0.62
TOP1P11387 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TOP1P11387 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TOP1P11387 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TOP1P11387 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TOP1P11387 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TOP1P11387 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.89■□□□□ 0.61
TOP1P11387 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TOP1P11387 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms