Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CALM3P0DP25 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.66■□□□□ 0.58
CALM3P0DP25 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.66■□□□□ 0.58
CALM3P0DP25 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CALM3P0DP25 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
CALM3P0DP25 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CALM3P0DP25 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.66■□□□□ 0.58
CALM3P0DP25 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CALM3P0DP25 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CALM3P0DP25 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.65■□□□□ 0.58
CALM3P0DP25 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 AC092580.3-201ENST00000430932 139 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CALM3P0DP25 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 PHKG1P2-201ENST00000457537 863 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 AL450472.2-201ENST00000603663 1156 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 MIR6069-201ENST00000620069 79 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.65■□□□□ 0.58
CALM3P0DP25 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.65■□□□□ 0.58
CALM3P0DP25 AC010491.1-201ENST00000563101 2797 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 AC022188.1-201ENST00000620960 1664 ntBASIC18.65■□□□□ 0.58
CALM3P0DP25 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALM3P0DP25 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
CALM3P0DP25 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALM3P0DP25 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALM3P0DP25 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CALM3P0DP25 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CALM3P0DP25 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALM3P0DP25 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.64■□□□□ 0.58
CALM3P0DP25 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CALM3P0DP25 AC055876.3-201ENST00000431496 288 ntBASIC18.64■□□□□ 0.57
CALM3P0DP25 CYMP-203ENST00000474680 1263 ntBASIC18.64■□□□□ 0.57
CALM3P0DP25 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 AC138649.4-201ENST00000612222 287 ntBASIC18.64■□□□□ 0.57
CALM3P0DP25 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CALM3P0DP25 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CALM3P0DP25 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.64■□□□□ 0.57
CALM3P0DP25 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.64■□□□□ 0.57
CALM3P0DP25 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.64■□□□□ 0.57
CALM3P0DP25 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.64■□□□□ 0.57
CALM3P0DP25 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALM3P0DP25 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALM3P0DP25 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.63■□□□□ 0.57
CALM3P0DP25 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
CALM3P0DP25 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.63■□□□□ 0.57
CALM3P0DP25 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms