Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 AL133215.2-201ENST00000609242 977 ntBASIC16.31■□□□□ 0.2
HLA-DQB2P05538 Z92544.3-201ENST00000624747 417 ntBASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.3■□□□□ 0.2
HLA-DQB2P05538 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 RN7SL828P-201ENST00000607615 303 ntBASIC16.3■□□□□ 0.2
HLA-DQB2P05538 AC093028.1-201ENST00000622998 982 ntBASIC16.3■□□□□ 0.2
HLA-DQB2P05538 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB2P05538 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 REXO1L1P-202ENST00000608646 1974 ntBASIC16.29■□□□□ 0.2
HLA-DQB2P05538 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 MTND6P24-201ENST00000440466 518 ntBASIC16.29■□□□□ 0.2
HLA-DQB2P05538 EEF1DP4-201ENST00000446006 880 ntBASIC16.29■□□□□ 0.2
HLA-DQB2P05538 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC004449.1-201ENST00000564240 433 ntBASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB2P05538 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms