Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AL009178.2-201ENST00000597278 2719 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC097376.2-205ENST00000610159 5334 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AL109954.1-202ENST00000564051 2148 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AL662844.1-201ENST00000546340 181 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AC020765.3-201ENST00000613051 740 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 HLA-A-201ENST00000376802 1334 ntBASIC14.56□□□□□ -0.08
HLA-DPB1P04440 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPB1P04440 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms