Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 MIR3909-201ENST00000579518 119 ntBASIC14.55□□□□□ -0.08
HLA-DQA2P01906 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DQA2P01906 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 MRPL3P1-201ENST00000400109 1033 ntBASIC14.54□□□□□ -0.08
HLA-DQA2P01906 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 AL662844.1-201ENST00000546340 181 ntBASIC14.54□□□□□ -0.08
HLA-DQA2P01906 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 AC007064.4-201ENST00000637740 555 ntBASIC14.54□□□□□ -0.08
HLA-DQA2P01906 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA2P01906 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 IGLL3P-201ENST00000412472 434 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms