Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.55□□□□□ -0.24
ABCA1O95477 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.55□□□□□ -0.24
ABCA1O95477 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 AL033527.5-202ENST00000641632 1098 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA1O95477 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA1O95477 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.54□□□□□ -0.24
ABCA1O95477 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ABCA1O95477 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA1O95477 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA1O95477 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ABCA1O95477 AC092552.1-201ENST00000547243 906 ntBASIC13.54□□□□□ -0.24
ABCA1O95477 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 AC021097.1-201ENST00000607902 574 ntBASIC13.54□□□□□ -0.24
ABCA1O95477 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA1O95477 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA1O95477 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 AC087499.6-201ENST00000411576 835 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 TMEM14DP-201ENST00000422205 345 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 AC234783.1-201ENST00000441761 496 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 AC132872.4-202ENST00000622924 2756 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ABCA1O95477 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ABCA1O95477 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA1O95477 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA1O95477 AC020916.1-201ENST00000587762 1774 ntBASIC13.53□□□□□ -0.24
ABCA1O95477 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms