Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
CLSTN1O94985 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 KRT18P13-201ENST00000400056 1290 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 AC140658.5-201ENST00000438532 169 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.92■□□□□ 0.46
CLSTN1O94985 HLA-J-202ENST00000469281 1241 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 ALG1L5P-201ENST00000482043 771 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 AL009183.1-201ENST00000603760 355 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLSTN1O94985 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 AC092364.2-201ENST00000596710 2692 ntBASIC17.92■□□□□ 0.46
CLSTN1O94985 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLSTN1O94985 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLSTN1O94985 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.92■□□□□ 0.46
CLSTN1O94985 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLSTN1O94985 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
CLSTN1O94985 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.91■□□□□ 0.46
CLSTN1O94985 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.91■□□□□ 0.46
CLSTN1O94985 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLSTN1O94985 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLSTN1O94985 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.91■□□□□ 0.46
CLSTN1O94985 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AC138969.2-201ENST00000532739 9932 ntBASIC17.9■□□□□ 0.46
CLSTN1O94985 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.9■□□□□ 0.46
CLSTN1O94985 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 AL512652.2-201ENST00000625156 1716 ntBASIC17.9■□□□□ 0.46
CLSTN1O94985 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLSTN1O94985 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLSTN1O94985 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.9■□□□□ 0.46
CLSTN1O94985 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms