Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC3O60481 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
ZIC3O60481 BTBD7P1-201ENST00000447253 1453 ntBASIC14.44□□□□□ -0.1
ZIC3O60481 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC3O60481 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ZIC3O60481 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 AC112504.1-201ENST00000623415 1841 ntBASIC14.44□□□□□ -0.1
ZIC3O60481 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZIC3O60481 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC3O60481 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC3O60481 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC3O60481 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC3O60481 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 AC004840.1-201ENST00000636359 365 ntBASIC14.44□□□□□ -0.1
ZIC3O60481 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ZIC3O60481 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
ZIC3O60481 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
ZIC3O60481 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC3O60481 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC3O60481 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 AL391005.1-201ENST00000623953 2435 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 AC024909.3-201ENST00000611513 2257 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ZIC3O60481 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.43□□□□□ -0.1
ZIC3O60481 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC3O60481 AC002472.2-201ENST00000442739 958 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC3O60481 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC3O60481 MIR3197-201ENST00000582241 73 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC3O60481 AC025048.3-201ENST00000590609 569 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 AC005702.4-201ENST00000618393 416 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 AL109936.8-201ENST00000641772 604 ntBASIC14.43□□□□□ -0.1
ZIC3O60481 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC3O60481 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC3O60481 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC3O60481 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC3O60481 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC3O60481 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC3O60481 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms