Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LCMT2O60294 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.41■□□□□ 0.06
LCMT2O60294 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.41■□□□□ 0.06
LCMT2O60294 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 MTND6P24-201ENST00000440466 518 ntBASIC15.41■□□□□ 0.06
LCMT2O60294 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.41■□□□□ 0.06
LCMT2O60294 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.41■□□□□ 0.06
LCMT2O60294 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.41■□□□□ 0.06
LCMT2O60294 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.41■□□□□ 0.06
LCMT2O60294 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.41■□□□□ 0.06
LCMT2O60294 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LCMT2O60294 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCMT2O60294 CYP4F24P-201ENST00000586049 1580 ntBASIC15.41■□□□□ 0.06
LCMT2O60294 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LCMT2O60294 AP003680.1-201ENST00000598970 3660 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LCMT2O60294 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.4■□□□□ 0.06
LCMT2O60294 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.4■□□□□ 0.06
LCMT2O60294 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 AC243562.2-201ENST00000561247 970 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 AC051619.7-201ENST00000568314 623 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 AC015911.4-201ENST00000588022 1070 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 AC026979.3-201ENST00000607315 403 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.4■□□□□ 0.06
LCMT2O60294 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
LCMT2O60294 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LCMT2O60294 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.4■□□□□ 0.06
LCMT2O60294 AP001282.1-201ENST00000531301 1499 ntBASIC15.4■□□□□ 0.06
LCMT2O60294 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCMT2O60294 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.39■□□□□ 0.05
LCMT2O60294 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LCMT2O60294 AL035456.1-201ENST00000456064 1369 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.39■□□□□ 0.05
LCMT2O60294 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LCMT2O60294 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
LCMT2O60294 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LCMT2O60294 AC004987.2-201ENST00000395959 1148 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.39■□□□□ 0.05
LCMT2O60294 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.39■□□□□ 0.05
LCMT2O60294 PMS2P2-201ENST00000425039 1128 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 AL645939.2-201ENST00000427340 991 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.39■□□□□ 0.05
LCMT2O60294 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.39■□□□□ 0.05
LCMT2O60294 CNN2P2-201ENST00000443536 909 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.39■□□□□ 0.05
LCMT2O60294 CNN2P3-201ENST00000450201 906 ntBASIC15.39■□□□□ 0.05
LCMT2O60294 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms