Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF113AO15541 AL365203.3-201ENST00000609742 2057 ntBASIC19.25■□□□□ 0.67
RNF113AO15541 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF113AO15541 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF113AO15541 AC009477.1-201ENST00000452936 217 ntBASIC19.25■□□□□ 0.67
RNF113AO15541 RN7SL618P-201ENST00000477850 296 ntBASIC19.25■□□□□ 0.67
RNF113AO15541 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF113AO15541 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF113AO15541 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF113AO15541 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF113AO15541 AL450472.2-201ENST00000603663 1156 ntBASIC19.25■□□□□ 0.67
RNF113AO15541 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.25■□□□□ 0.67
RNF113AO15541 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF113AO15541 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF113AO15541 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF113AO15541 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 HMGN1P19-201ENST00000436976 333 ntBASIC19.24■□□□□ 0.67
RNF113AO15541 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF113AO15541 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF113AO15541 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF113AO15541 RNA5SP421-201ENST00000516864 134 ntBASIC19.24■□□□□ 0.67
RNF113AO15541 AC009407.1-201ENST00000568958 598 ntBASIC19.24■□□□□ 0.67
RNF113AO15541 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF113AO15541 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF113AO15541 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF113AO15541 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF113AO15541 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF113AO15541 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF113AO15541 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 AL512638.1-201ENST00000457493 794 ntBASIC19.23■□□□□ 0.67
RNF113AO15541 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF113AO15541 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF113AO15541 ZNF890P-202ENST00000530367 1156 ntBASIC19.23■□□□□ 0.67
RNF113AO15541 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.23■□□□□ 0.67
RNF113AO15541 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF113AO15541 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
RNF113AO15541 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF113AO15541 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF113AO15541 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF113AO15541 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF113AO15541 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RNF113AO15541 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF113AO15541 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF113AO15541 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF113AO15541 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms