Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2A1O14983 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATP2A1O14983 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ATP2A1O14983 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 AC106820.2-201ENST00000563775 3264 ntBASIC18.35■□□□□ 0.53
ATP2A1O14983 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 AC074338.1-201ENST00000416825 156 ntBASIC18.35■□□□□ 0.53
ATP2A1O14983 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A1O14983 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A1O14983 AC092552.1-201ENST00000547243 906 ntBASIC18.35■□□□□ 0.53
ATP2A1O14983 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A1O14983 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2A1O14983 MIR8072-201ENST00000614241 80 ntBASIC18.35■□□□□ 0.53
ATP2A1O14983 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A1O14983 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A1O14983 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ATP2A1O14983 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 AD000864.1-201ENST00000624076 2295 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 AP001282.1-201ENST00000531301 1499 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2A1O14983 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A1O14983 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 PCDHA12-202ENST00000613593 2588 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2A1O14983 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 RN7SL399P-201ENST00000471648 279 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 IGHV3-71-201ENST00000523324 359 ntBASIC18.34■□□□□ 0.53
ATP2A1O14983 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.34■□□□□ 0.53
ATP2A1O14983 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.34■□□□□ 0.53
ATP2A1O14983 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP2A1O14983 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
ATP2A1O14983 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2A1O14983 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A1O14983 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2A1O14983 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A1O14983 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A1O14983 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2A1O14983 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A1O14983 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.33■□□□□ 0.53
ATP2A1O14983 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
ATP2A1O14983 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP2A1O14983 AC080080.1-201ENST00000625121 2420 ntBASIC18.33■□□□□ 0.53
ATP2A1O14983 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2A1O14983 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms