Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SOX1O00570 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 AL354989.2-201ENST00000435838 1540 ntBASIC16.89■□□□□ 0.29
SOX1O00570 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SOX1O00570 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SOX1O00570 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.89■□□□□ 0.29
SOX1O00570 AC138028.4-201ENST00000564984 1845 ntBASIC16.89■□□□□ 0.29
SOX1O00570 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
SOX1O00570 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SOX1O00570 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
SOX1O00570 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.88■□□□□ 0.29
SOX1O00570 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.88■□□□□ 0.29
SOX1O00570 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SOX1O00570 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.88■□□□□ 0.29
SOX1O00570 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.88■□□□□ 0.29
SOX1O00570 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.88■□□□□ 0.29
SOX1O00570 AL353770.1-201ENST00000614915 403 ntBASIC16.88■□□□□ 0.29
SOX1O00570 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SOX1O00570 OR6D1P-202ENST00000641007 5290 ntBASIC16.88■□□□□ 0.29
SOX1O00570 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SOX1O00570 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SOX1O00570 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SOX1O00570 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.88■□□□□ 0.29
SOX1O00570 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
SOX1O00570 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.87■□□□□ 0.29
SOX1O00570 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.87■□□□□ 0.29
SOX1O00570 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SOX1O00570 AC079178.1-201ENST00000420915 656 ntBASIC16.87■□□□□ 0.29
SOX1O00570 AL157792.1-201ENST00000488281 530 ntBASIC16.87■□□□□ 0.29
SOX1O00570 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.87■□□□□ 0.29
SOX1O00570 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.87■□□□□ 0.29
SOX1O00570 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SOX1O00570 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.87■□□□□ 0.29
SOX1O00570 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SOX1O00570 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX1O00570 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 PKD1P1-201ENST00000458669 6805 ntBASIC16.86■□□□□ 0.29
SOX1O00570 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.86■□□□□ 0.29
SOX1O00570 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.86■□□□□ 0.29
SOX1O00570 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms