Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
AP3B1O00203 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 SLC25A1P1-201ENST00000528351 927 ntBASIC16.31■□□□□ 0.2
AP3B1O00203 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.31■□□□□ 0.2
AP3B1O00203 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.31■□□□□ 0.2
AP3B1O00203 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3B1O00203 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3B1O00203 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.31■□□□□ 0.2
AP3B1O00203 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.31■□□□□ 0.2
AP3B1O00203 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP3B1O00203 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
AP3B1O00203 LINC00554-201ENST00000564841 3011 ntBASIC16.31■□□□□ 0.2
AP3B1O00203 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
AP3B1O00203 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 AC004987.2-201ENST00000395959 1148 ntBASIC16.3■□□□□ 0.2
AP3B1O00203 MCCD1P2-201ENST00000423228 335 ntBASIC16.3■□□□□ 0.2
AP3B1O00203 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.3■□□□□ 0.2
AP3B1O00203 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.3■□□□□ 0.2
AP3B1O00203 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.3■□□□□ 0.2
AP3B1O00203 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.3■□□□□ 0.2
AP3B1O00203 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 PAUPAR-201ENST00000630360 2965 ntBASIC16.3■□□□□ 0.2
AP3B1O00203 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
AP3B1O00203 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3B1O00203 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3B1O00203 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3B1O00203 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
AP3B1O00203 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.29■□□□□ 0.2
AP3B1O00203 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 FAM58CP-201ENST00000435741 640 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 SPDYE11-202ENST00000450699 704 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.29■□□□□ 0.2
AP3B1O00203 AL138918.1-201ENST00000568306 659 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 SPDYE9P-201ENST00000570642 692 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3B1O00203 AC026120.1-201ENST00000611536 926 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 SPDYE10P-202ENST00000612005 668 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 SPDYE8P-202ENST00000612377 668 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3B1O00203 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3B1O00203 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.29■□□□□ 0.2
AP3B1O00203 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 283.9 ms