Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.14■□□□□ 0.33
RCCD1A6NED2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 PAX6-247ENST00000638965 979 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AL009178.2-201ENST00000597278 2719 ntBASIC17.14■□□□□ 0.33
RCCD1A6NED2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.13■□□□□ 0.33
RCCD1A6NED2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 AC096734.2-201ENST00000562054 433 ntBASIC17.13■□□□□ 0.33
RCCD1A6NED2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 CICP23-201ENST00000605013 2741 ntBASIC17.13■□□□□ 0.33
RCCD1A6NED2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.13■□□□□ 0.33
RCCD1A6NED2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCCD1A6NED2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
RCCD1A6NED2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.12■□□□□ 0.33
RCCD1A6NED2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 RPS2P28-201ENST00000314255 741 ntBASIC17.12■□□□□ 0.33
RCCD1A6NED2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 MIR4313-201ENST00000580760 101 ntBASIC17.12■□□□□ 0.33
RCCD1A6NED2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.12■□□□□ 0.33
RCCD1A6NED2 AC116407.3-201ENST00000623905 1129 ntBASIC17.12■□□□□ 0.33
RCCD1A6NED2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCCD1A6NED2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms