Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AP005117.1-202ENST00000581724 1908 ntBASIC15.3■□□□□ 0.04
LRIT2A6NDA9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AL133215.2-201ENST00000609242 977 ntBASIC15.3■□□□□ 0.04
LRIT2A6NDA9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 Z92544.3-201ENST00000624747 417 ntBASIC15.3■□□□□ 0.04
LRIT2A6NDA9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRIT2A6NDA9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 KRT18P28-201ENST00000453838 1332 ntBASIC15.29■□□□□ 0.04
LRIT2A6NDA9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 AC015911.4-201ENST00000588022 1070 ntBASIC15.29■□□□□ 0.04
LRIT2A6NDA9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LRIT2A6NDA9 AL162727.3-201ENST00000635661 2787 ntBASIC15.29■□□□□ 0.04
LRIT2A6NDA9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms