Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC22.89■■□□□ 1.26
CCDC144AA2RUR9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
CCDC144AA2RUR9 AL596087.1-201ENST00000400979 1969 ntBASIC22.89■■□□□ 1.26
CCDC144AA2RUR9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 AL359711.2-201ENST00000563105 872 ntBASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC144AA2RUR9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 AC119751.2-201ENST00000504529 210 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 MIR6805-201ENST00000615055 62 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 CU634019.7-201ENST00000624153 1185 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 FP236241.2-201ENST00000624906 1185 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 ABBA01031660.1-201ENST00000635219 756 ntBASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
CCDC144AA2RUR9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 AC120045.2-201ENST00000567334 178 ntBASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC144AA2RUR9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 SNX29P1-201ENST00000548357 1007 ntBASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 AC133539.2-201ENST00000604757 467 ntBASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 AL512343.1-201ENST00000605837 169 ntBASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC144AA2RUR9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC22.85■■□□□ 1.25
CCDC144AA2RUR9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms