Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 MTDHP4-201ENST00000600287 670 ntBASIC14.07□□□□□ -0.16
SHISA3A0PJX4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AC012569.1-201ENST00000591191 1524 ntBASIC14.06□□□□□ -0.16
SHISA3A0PJX4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AC026396.1-201ENST00000419388 421 ntBASIC14.06□□□□□ -0.16
SHISA3A0PJX4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 NPAP1P7-201ENST00000613027 823 ntBASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 GGTLC5P-201ENST00000617623 998 ntBASIC14.06□□□□□ -0.16
SHISA3A0PJX4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AC041040.2-201ENST00000622926 2899 ntBASIC14.06□□□□□ -0.16
SHISA3A0PJX4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHISA3A0PJX4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC126365.1-201ENST00000578585 1514 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC018892.3-201ENST00000623986 2499 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 RNU1-129P-201ENST00000384064 167 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 RBM17P3-201ENST00000417687 1192 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 DUSP5P1-201ENST00000441325 1139 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC245100.5-201ENST00000452108 331 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 U1.21-201ENST00000580816 167 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 MTDHP3-201ENST00000594186 672 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 AC138894.3-201ENST00000603787 634 ntBASIC14.05□□□□□ -0.16
SHISA3A0PJX4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
SHISA3A0PJX4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms