Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC092506.1-202ENST00000401022 528 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 CALR4P-201ENST00000431943 946 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 FAM197Y7-201ENST00000432892 766 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC104306.2-201ENST00000451877 341 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 RNA5SP423-201ENST00000517127 109 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC107373.2-201ENST00000607735 490 ntBASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 Z93015.1-201ENST00000451718 390 ntBASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AP001582.1-201ENST00000525856 295 ntBASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC078819.1-201ENST00000547454 765 ntBASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC012085.1-201ENST00000548270 765 ntBASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.2■□□□□ 0.82
LOC102724428A0A0B4J2F2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC015910.1-201ENST00000579400 975 ntBASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 AC005052.1-201ENST00000625181 2492 ntBASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LOC102724428A0A0B4J2F2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LOC102724428A0A0B4J2F2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms