Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AL022342.1-201ENST00000400363 863 ntBASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AC023274.1-201ENST00000418278 595 ntBASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AC092865.6-201ENST00000642101 219 ntBASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AL592424.1-201ENST00000563624 1536 ntBASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 KRT18P58-201ENST00000527480 1120 ntBASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 PMS2P7-201ENST00000506558 1336 ntBASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV1A0A0A0MS02 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 AC132872.4-202ENST00000622924 2756 ntBASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRGV1A0A0A0MS02 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms