Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2D4Q9Y2X8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 AC245100.5-201ENST00000452108 331 ntBASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 MIR3909-201ENST00000579518 119 ntBASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 AC091076.1-201ENST00000610741 619 ntBASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 AC107918.4-202ENST00000641623 219 ntBASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D4Q9Y2X8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MIR600HG-201ENST00000449175 5984 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 RNU1-129P-201ENST00000384064 167 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 KRT18P27-201ENST00000427733 1299 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 DUSP5P1-201ENST00000441325 1139 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 KRT18P21-201ENST00000515767 1272 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 U1.21-201ENST00000580816 167 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MIR4515-201ENST00000584082 81 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AL031055.1-201ENST00000606362 631 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AC008667.4-201ENST00000607370 168 ntBASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms