Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AC005622.1-201ENST00000636801 1703 ntBASIC18.54■□□□□ 0.56
USP25Q9UHP3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AC098831.1-202ENST00000438821 336 ntBASIC18.54■□□□□ 0.56
USP25Q9UHP3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.54■□□□□ 0.56
USP25Q9UHP3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP25Q9UHP3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.54■□□□□ 0.56
USP25Q9UHP3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CICP24-201ENST00000605464 2705 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CRYGEP-201ENST00000412192 528 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 AC009947.1-201ENST00000444350 727 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 AL049840.3-201ENST00000602669 611 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 AC138035.3-201ENST00000622706 2791 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 AC116407.3-201ENST00000623905 1129 ntBASIC18.53■□□□□ 0.56
USP25Q9UHP3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP25Q9UHP3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP25Q9UHP3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 AC106881.1-201ENST00000605849 3329 ntBASIC18.52■□□□□ 0.56
USP25Q9UHP3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 HCG4B-203ENST00000450128 991 ntBASIC18.52■□□□□ 0.56
USP25Q9UHP3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 RNA5SP419-201ENST00000515908 135 ntBASIC18.52■□□□□ 0.56
USP25Q9UHP3 UNC93B6-202ENST00000528242 690 ntBASIC18.52■□□□□ 0.56
USP25Q9UHP3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.52■□□□□ 0.56
USP25Q9UHP3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP25Q9UHP3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms