Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 AC112482.1-201ENST00000492080 688 ntBASIC16.04■□□□□ 0.16
TREX1Q9NSU2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 AC010327.4-202ENST00000591484 748 ntBASIC16.04■□□□□ 0.16
TREX1Q9NSU2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREX1Q9NSU2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 SSR4P1-203ENST00000599569 2260 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 PPT1-215ENST00000641471 2368 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 BX842568.4-201ENST00000421222 227 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 GPS2P2-201ENST00000430745 888 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC005237.2-201ENST00000434368 219 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AP000344.2-201ENST00000512987 629 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 ALG1L8P-201ENST00000533887 760 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 MIR4313-201ENST00000580760 101 ntBASIC16.03■□□□□ 0.16
TREX1Q9NSU2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TREX1Q9NSU2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 KRT8P37-201ENST00000451609 1420 ntBASIC16.02■□□□□ 0.16
TREX1Q9NSU2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 AC013268.4-201ENST00000637413 2228 ntBASIC16.02■□□□□ 0.16
TREX1Q9NSU2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TREX1Q9NSU2 UPF3AP3-201ENST00000420996 769 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms