Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AL592309.1-201ENST00000443127 649 ntBASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.52■□□□□ 0.08
NECTIN3Q9NQS3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NECTIN3Q9NQS3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 LINC01225-203ENST00000563550 1244 ntBASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.51■□□□□ 0.07
NECTIN3Q9NQS3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms