Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC008741.2-201ENST00000612792 3115 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
GCM1Q9NP62 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GCM1Q9NP62 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GCM1Q9NP62 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 GPS2P2-201ENST00000430745 888 ntBASIC13.83□□□□□ -0.2
GCM1Q9NP62 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 LINC00628-201ENST00000628516 1289 ntBASIC13.83□□□□□ -0.2
GCM1Q9NP62 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.83□□□□□ -0.2
GCM1Q9NP62 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 AC097376.2-205ENST00000610159 5334 ntBASIC13.83□□□□□ -0.2
GCM1Q9NP62 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.83□□□□□ -0.2
GCM1Q9NP62 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GCM1Q9NP62 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 AL139400.1-201ENST00000366220 510 ntBASIC13.82□□□□□ -0.2
GCM1Q9NP62 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 METTL21AP1-201ENST00000438852 635 ntBASIC13.82□□□□□ -0.2
GCM1Q9NP62 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 ALG1L8P-201ENST00000533887 760 ntBASIC13.82□□□□□ -0.2
GCM1Q9NP62 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.82□□□□□ -0.2
GCM1Q9NP62 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GCM1Q9NP62 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms