Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC004877.2-201ENST00000623941 599 ntBASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 AC010507.1-201ENST00000633895 436 ntBASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AC144831.1-201ENST00000573312 2656 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 HAUS4P1-201ENST00000406739 1145 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AC245100.5-201ENST00000452108 331 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 SSR4P1-203ENST00000599569 2260 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 PRAL-201ENST00000624952 3286 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 BCAR1-209ENST00000546196 1340 ntBASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXP3Q9BZS1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 CNN2P11-201ENST00000429351 262 ntBASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 CEND1P1-201ENST00000451006 455 ntBASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 AC011477.6-201ENST00000604980 1927 ntBASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXP3Q9BZS1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXP3Q9BZS1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms