Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 ME2P1-201ENST00000426028 1970 ntBASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 AC103810.3-201ENST00000583567 96 ntBASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 AC008687.7-202ENST00000637404 953 ntBASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH11XQ9BZA7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AC106820.2-201ENST00000563775 3264 ntBASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 RPL13AP20-201ENST00000459725 609 ntBASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AC243960.2-201ENST00000600996 747 ntBASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AC107373.2-201ENST00000607735 490 ntBASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 DRD5P1-201ENST00000456605 1438 ntBASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH11XQ9BZA7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 ACKR1-201ENST00000368121 1240 ntBASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms