Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FGFR3P5-201ENST00000564496 886 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 AC104982.3-201ENST00000581995 514 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 RN7SL736P-201ENST00000613111 269 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 MIR6069-201ENST00000620069 79 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 Z99916.3-201ENST00000623422 1080 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 AC141586.5-201ENST00000624546 2050 ntBASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTNAP3Q9BZ76 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CNTNAP3Q9BZ76 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AL627389.1-201ENST00000413508 1182 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 CYP46A4P-201ENST00000414953 267 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AL442647.2-201ENST00000429864 857 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 RN7SL399P-201ENST00000471648 279 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AC098859.1-201ENST00000502915 1238 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 KRT90P-201ENST00000549264 1064 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AC244517.3-201ENST00000616254 1235 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AHCYP2-201ENST00000430630 1300 ntBASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTNAP3Q9BZ76 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTNAP3Q9BZ76 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms