Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 BEND3P1-201ENST00000421591 1944 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 FAM220CP-201ENST00000395253 831 ntBASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AP002469.2-201ENST00000531724 424 ntBASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AC124947.2-201ENST00000547118 1133 ntBASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 AC232323.1-201ENST00000540724 2099 ntBASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 REXO1L5P-201ENST00000622260 2098 ntBASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.57□□□□□ -0.4
NDUFAF3Q9BU61 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC125634.1-201ENST00000438758 1403 ntBASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC009078.2-202ENST00000463353 338 ntBASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC079776.4-201ENST00000511039 504 ntBASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 713.9 ms