Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AC008735.5-201ENST00000623544 497 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AC006449.5-201ENST00000610658 2098 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PEG13-201ENST00000631594 5667 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PAUPAR-201ENST00000630360 2965 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 FAM197Y8-203ENST00000450145 560 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 RNPS1P1-201ENST00000507437 918 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AF238378.1-201ENST00000526806 358 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 MPDU1-223ENST00000582151 728 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AL356488.2-201ENST00000602755 427 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms