Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 NME2P1-201ENST00000426182 414 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 DFFBP1-201ENST00000433250 979 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 SPDYE18-201ENST00000510091 1050 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 DOC2GP-202ENST00000514950 1163 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 MIR6069-201ENST00000620069 79 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 AL662844.4-201ENST00000606367 2838 ntBASIC18.72■□□□□ 0.59
SLF1Q9BQI6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF1Q9BQI6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 SPDYE19P-201ENST00000338590 713 ntBASIC18.71■□□□□ 0.59
SLF1Q9BQI6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 COX5BP8-201ENST00000416911 349 ntBASIC18.71■□□□□ 0.59
SLF1Q9BQI6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 POU5F1P6-201ENST00000466990 990 ntBASIC18.71■□□□□ 0.59
SLF1Q9BQI6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 SDHAP3-202ENST00000515467 728 ntBASIC18.71■□□□□ 0.59
SLF1Q9BQI6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 AC140912.1-201ENST00000577171 1054 ntBASIC18.71■□□□□ 0.59
SLF1Q9BQI6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF1Q9BQI6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.58
SLF1Q9BQI6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLF1Q9BQI6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SLF1Q9BQI6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.58
SLF1Q9BQI6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.7■□□□□ 0.58
SLF1Q9BQI6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms