Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.83■□□□□ 0.28
SMOQ99835 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 SPTLC1P1-201ENST00000447199 261 ntBASIC16.83■□□□□ 0.28
SMOQ99835 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.83■□□□□ 0.28
SMOQ99835 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.83■□□□□ 0.28
SMOQ99835 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.83■□□□□ 0.28
SMOQ99835 PHKG1P2-201ENST00000457537 863 ntBASIC16.83■□□□□ 0.28
SMOQ99835 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SMOQ99835 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 LINC02084-201ENST00000606069 1096 ntBASIC16.83■□□□□ 0.28
SMOQ99835 AC004461.2-201ENST00000629517 803 ntBASIC16.83■□□□□ 0.28
SMOQ99835 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMOQ99835 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMOQ99835 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMOQ99835 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 AC011477.6-201ENST00000604980 1927 ntBASIC16.82■□□□□ 0.28
SMOQ99835 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMOQ99835 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SMOQ99835 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.82■□□□□ 0.28
SMOQ99835 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.82■□□□□ 0.28
SMOQ99835 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.82■□□□□ 0.28
SMOQ99835 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SMOQ99835 AC138761.1-201ENST00000584393 385 ntBASIC16.82■□□□□ 0.28
SMOQ99835 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.82■□□□□ 0.28
SMOQ99835 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.82■□□□□ 0.28
SMOQ99835 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.82■□□□□ 0.28
SMOQ99835 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.82■□□□□ 0.28
SMOQ99835 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.82■□□□□ 0.28
SMOQ99835 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMOQ99835 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.82■□□□□ 0.28
SMOQ99835 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.82■□□□□ 0.28
SMOQ99835 AC112504.1-201ENST00000623415 1841 ntBASIC16.82■□□□□ 0.28
SMOQ99835 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMOQ99835 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMOQ99835 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.81■□□□□ 0.28
SMOQ99835 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMOQ99835 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 AC074338.1-201ENST00000416825 156 ntBASIC16.81■□□□□ 0.28
SMOQ99835 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SMOQ99835 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.81■□□□□ 0.28
SMOQ99835 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.81■□□□□ 0.28
SMOQ99835 AL450472.2-201ENST00000603663 1156 ntBASIC16.81■□□□□ 0.28
SMOQ99835 AC009118.2-201ENST00000613275 655 ntBASIC16.81■□□□□ 0.28
SMOQ99835 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 AL391005.1-201ENST00000623953 2435 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms