Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE1Q99829 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE1Q99829 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE1Q99829 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE1Q99829 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE1Q99829 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE1Q99829 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE1Q99829 AC064836.3-201ENST00000607928 673 ntBASIC16.14■□□□□ 0.17
CPNE1Q99829 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE1Q99829 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE1Q99829 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE1Q99829 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 AC134407.2-201ENST00000625089 1978 ntBASIC16.13■□□□□ 0.17
CPNE1Q99829 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE1Q99829 AC145285.3-201ENST00000564603 959 ntBASIC16.13■□□□□ 0.17
CPNE1Q99829 AC018845.2-201ENST00000568326 409 ntBASIC16.13■□□□□ 0.17
CPNE1Q99829 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 AC023157.3-201ENST00000619086 2088 ntBASIC16.13■□□□□ 0.17
CPNE1Q99829 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CPNE1Q99829 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE1Q99829 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE1Q99829 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE1Q99829 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE1Q99829 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE1Q99829 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CPNE1Q99829 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE1Q99829 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE1Q99829 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE1Q99829 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE1Q99829 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE1Q99829 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE1Q99829 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE1Q99829 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE1Q99829 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE1Q99829 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE1Q99829 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE1Q99829 AC068137.2-201ENST00000605408 478 ntBASIC16.12■□□□□ 0.17
CPNE1Q99829 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE1Q99829 NORAD-201ENST00000565493 5339 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms