Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
CDC6Q99741 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.51■□□□□ 0.07
CDC6Q99741 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 AL355864.2-201ENST00000447420 863 ntBASIC15.51■□□□□ 0.07
CDC6Q99741 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.51■□□□□ 0.07
CDC6Q99741 AC079316.1-201ENST00000548397 411 ntBASIC15.51■□□□□ 0.07
CDC6Q99741 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 AL391069.4-201ENST00000609583 481 ntBASIC15.51■□□□□ 0.07
CDC6Q99741 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 AC092068.3-201ENST00000587894 2016 ntBASIC15.51■□□□□ 0.07
CDC6Q99741 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC6Q99741 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDC6Q99741 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC6Q99741 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDC6Q99741 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC6Q99741 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDC6Q99741 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 BCRP2-202ENST00000447763 634 ntBASIC15.5■□□□□ 0.07
CDC6Q99741 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC6Q99741 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.5■□□□□ 0.07
CDC6Q99741 BCRP6-201ENST00000510112 632 ntBASIC15.5■□□□□ 0.07
CDC6Q99741 BCRP7-201ENST00000511549 544 ntBASIC15.5■□□□□ 0.07
CDC6Q99741 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC6Q99741 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC6Q99741 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC6Q99741 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC6Q99741 AC244093.1-201ENST00000610837 814 ntBASIC15.5■□□□□ 0.07
CDC6Q99741 AL158212.4-201ENST00000624062 1286 ntBASIC15.5■□□□□ 0.07
CDC6Q99741 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC6Q99741 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC6Q99741 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC6Q99741 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDC6Q99741 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC6Q99741 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDC6Q99741 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC6Q99741 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDC6Q99741 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC6Q99741 CROCCP2-202ENST00000412962 2773 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms