Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.06■□□□□ 0.32
RAD9AQ99638 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD9AQ99638 AC023310.1-201ENST00000554836 735 ntBASIC17.06■□□□□ 0.32
RAD9AQ99638 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.06■□□□□ 0.32
RAD9AQ99638 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD9AQ99638 AL118558.3-201ENST00000607414 1079 ntBASIC17.06■□□□□ 0.32
RAD9AQ99638 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAD9AQ99638 AL354718.3-201ENST00000616414 581 ntBASIC17.06■□□□□ 0.32
RAD9AQ99638 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 CR382287.1-201ENST00000623954 586 ntBASIC17.06■□□□□ 0.32
RAD9AQ99638 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAD9AQ99638 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD9AQ99638 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAD9AQ99638 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.06■□□□□ 0.32
RAD9AQ99638 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RAD9AQ99638 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 SLED1-202ENST00000512051 380 ntBASIC17.05■□□□□ 0.32
RAD9AQ99638 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AP001258.2-201ENST00000529891 490 ntBASIC17.05■□□□□ 0.32
RAD9AQ99638 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD9AQ99638 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.05■□□□□ 0.32
RAD9AQ99638 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 AL022328.3-201ENST00000607943 679 ntBASIC17.05■□□□□ 0.32
RAD9AQ99638 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
RAD9AQ99638 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 BNIP3P1-202ENST00000550043 1585 ntBASIC17.05■□□□□ 0.32
RAD9AQ99638 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 PP12613-201ENST00000424958 2230 ntBASIC17.05■□□□□ 0.32
RAD9AQ99638 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
RAD9AQ99638 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAD9AQ99638 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.05■□□□□ 0.32
RAD9AQ99638 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD9AQ99638 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 ACKR1-201ENST00000368121 1240 ntBASIC17.04■□□□□ 0.32
RAD9AQ99638 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 POU5F1P6-201ENST00000466990 990 ntBASIC17.04■□□□□ 0.32
RAD9AQ99638 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 RHOQP1-201ENST00000555758 579 ntBASIC17.04■□□□□ 0.32
RAD9AQ99638 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD9AQ99638 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RAD9AQ99638 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD9AQ99638 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms