Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.34■□□□□ 0.21
NOTCH4Q99466 AC093813.1-201ENST00000605066 256 ntBASIC16.34■□□□□ 0.21
NOTCH4Q99466 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.34■□□□□ 0.21
NOTCH4Q99466 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NOTCH4Q99466 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
NOTCH4Q99466 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH4Q99466 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 RNU1-114P-201ENST00000365297 166 ntBASIC16.33■□□□□ 0.21
NOTCH4Q99466 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 AP001063.1-201ENST00000568332 529 ntBASIC16.33■□□□□ 0.21
NOTCH4Q99466 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.33■□□□□ 0.21
NOTCH4Q99466 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH4Q99466 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 AC020907.1-201ENST00000616460 1350 ntBASIC16.33■□□□□ 0.2
NOTCH4Q99466 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NOTCH4Q99466 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.33■□□□□ 0.2
NOTCH4Q99466 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 AC245100.3-201ENST00000441281 285 ntBASIC16.32■□□□□ 0.2
NOTCH4Q99466 AC007551.1-201ENST00000457394 519 ntBASIC16.32■□□□□ 0.2
NOTCH4Q99466 RPL13AP20-201ENST00000459725 609 ntBASIC16.32■□□□□ 0.2
NOTCH4Q99466 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.32■□□□□ 0.2
NOTCH4Q99466 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NOTCH4Q99466 AC018695.7-201ENST00000624587 2492 ntBASIC16.32■□□□□ 0.2
NOTCH4Q99466 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NOTCH4Q99466 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.31■□□□□ 0.2
NOTCH4Q99466 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 RN7SL219P-201ENST00000582872 296 ntBASIC16.31■□□□□ 0.2
NOTCH4Q99466 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.31■□□□□ 0.2
NOTCH4Q99466 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms