Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 YBX2P1-201ENST00000394192 760 ntBASIC16.67■□□□□ 0.26
C9orf72Q96LT7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 MIR4751-201ENST00000578027 74 ntBASIC16.67■□□□□ 0.26
C9orf72Q96LT7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 GGTLC5P-201ENST00000617623 998 ntBASIC16.67■□□□□ 0.26
C9orf72Q96LT7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 SSR4P1-203ENST00000599569 2260 ntBASIC16.67■□□□□ 0.26
C9orf72Q96LT7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf72Q96LT7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 LINC02228-204ENST00000642115 2962 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 UPF3AP3-201ENST00000420996 769 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 PRSS29P-201ENST00000440800 595 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 VN2R19P-201ENST00000442399 1052 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AC002347.1-201ENST00000569543 541 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AC004790.2-201ENST00000623588 572 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 AC092919.2-201ENST00000623631 1645 ntBASIC16.66■□□□□ 0.26
C9orf72Q96LT7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf72Q96LT7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 AC004832.2-201ENST00000426397 482 ntBASIC16.65■□□□□ 0.26
C9orf72Q96LT7 DNAJB3-201ENST00000446806 729 ntBASIC16.65■□□□□ 0.26
C9orf72Q96LT7 KRT18P2-201ENST00000447938 1258 ntBASIC16.65■□□□□ 0.26
C9orf72Q96LT7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf72Q96LT7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms