Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 ALG1L8P-201ENST00000533887 760 ntBASIC18.74■□□□□ 0.59
PGBD1Q96JS3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 Z92544.3-201ENST00000624747 417 ntBASIC18.74■□□□□ 0.59
PGBD1Q96JS3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD1Q96JS3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 AP3S2-216ENST00000617003 1561 ntBASIC18.73■□□□□ 0.59
PGBD1Q96JS3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 AC027796.2-201ENST00000575326 344 ntBASIC18.73■□□□□ 0.59
PGBD1Q96JS3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.73■□□□□ 0.59
PGBD1Q96JS3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD1Q96JS3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 AC008677.1-201ENST00000519230 1561 ntBASIC18.72■□□□□ 0.59
PGBD1Q96JS3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PGBD1Q96JS3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms