Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP6Q96FZ7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AC074051.2-201ENST00000565115 352 ntBASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AC233702.3-201ENST00000578656 1387 ntBASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AC010331.1-201ENST00000611423 582 ntBASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AC005912.2-201ENST00000619492 2400 ntBASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP6Q96FZ7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC090616.6-203ENST00000579186 1945 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 OR2I1P-210ENST00000642037 4691 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC104819.1-201ENST00000504587 486 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC011467.2-201ENST00000598425 242 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AL445228.2-201ENST00000605589 952 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC091076.1-201ENST00000610741 619 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP6Q96FZ7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms