Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 AL603832.2-201ENST00000566195 2125 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 AC008677.1-201ENST00000519230 1561 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 SLC25A39P2-201ENST00000537614 270 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 AC027307.2-201ENST00000591252 911 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 AC084121.4-201ENST00000641598 221 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 AF228730.8-201ENST00000642140 221 ntBASIC19.19■□□□□ 0.66
DDX11Q96FC9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX11Q96FC9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
DDX11Q96FC9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MIR3909-201ENST00000579518 119 ntBASIC19.18■□□□□ 0.66
DDX11Q96FC9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX11Q96FC9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX11Q96FC9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms