Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.09■□□□□ 0.33
TIFAQ96CG3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.09■□□□□ 0.33
TIFAQ96CG3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.09■□□□□ 0.33
TIFAQ96CG3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TIFAQ96CG3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIFAQ96CG3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TIFAQ96CG3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TIFAQ96CG3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TIFAQ96CG3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 AC141586.5-201ENST00000624546 2050 ntBASIC17.08■□□□□ 0.33
TIFAQ96CG3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.08■□□□□ 0.33
TIFAQ96CG3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIFAQ96CG3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
TIFAQ96CG3 AL512652.2-201ENST00000625156 1716 ntBASIC17.08■□□□□ 0.32
TIFAQ96CG3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 KRT8P37-201ENST00000451609 1420 ntBASIC17.08■□□□□ 0.32
TIFAQ96CG3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIFAQ96CG3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 MIR4741-201ENST00000579822 90 ntBASIC17.08■□□□□ 0.32
TIFAQ96CG3 MIR5572-201ENST00000583188 137 ntBASIC17.08■□□□□ 0.32
TIFAQ96CG3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIFAQ96CG3 AC005332.8-201ENST00000622750 2735 ntBASIC17.08■□□□□ 0.32
TIFAQ96CG3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIFAQ96CG3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIFAQ96CG3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIFAQ96CG3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.08■□□□□ 0.32
TIFAQ96CG3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 LINC02012-201ENST00000608206 1725 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 AHCYP2-201ENST00000430630 1300 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 AC104982.3-201ENST00000581995 514 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 AC138627.1-207ENST00000641560 1006 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 AL139011.1-202ENST00000642063 584 ntBASIC17.07■□□□□ 0.32
TIFAQ96CG3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIFAQ96CG3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.07■□□□□ 0.32
TIFAQ96CG3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms