Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CLDN23Q96B33 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN23Q96B33 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN23Q96B33 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN23Q96B33 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN23Q96B33 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN23Q96B33 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 AC060834.1-201ENST00000443027 2032 ntBASIC15.89■□□□□ 0.13
CLDN23Q96B33 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 AC009053.2-201ENST00000563701 2365 ntBASIC15.89■□□□□ 0.13
CLDN23Q96B33 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.89■□□□□ 0.13
CLDN23Q96B33 AP005019.2-201ENST00000615104 511 ntBASIC15.89■□□□□ 0.13
CLDN23Q96B33 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.89■□□□□ 0.13
CLDN23Q96B33 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN23Q96B33 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN23Q96B33 HTR7P1-202ENST00000624664 4411 ntBASIC15.88■□□□□ 0.13
CLDN23Q96B33 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 HNRNPUP1-201ENST00000554987 333 ntBASIC15.88■□□□□ 0.13
CLDN23Q96B33 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 AC016629.1-201ENST00000596579 586 ntBASIC15.88■□□□□ 0.13
CLDN23Q96B33 AL450472.2-201ENST00000603663 1156 ntBASIC15.88■□□□□ 0.13
CLDN23Q96B33 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 AC138951.2-201ENST00000623455 1161 ntBASIC15.88■□□□□ 0.13
CLDN23Q96B33 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN23Q96B33 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN23Q96B33 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 AP001282.1-201ENST00000531301 1499 ntBASIC15.87■□□□□ 0.13
CLDN23Q96B33 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN23Q96B33 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
CLDN23Q96B33 AL662890.1-201ENST00000396818 632 ntBASIC15.87■□□□□ 0.13
CLDN23Q96B33 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms