Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 MIR661-201ENST00000384842 89 ntBASIC17.03■□□□□ 0.32
ATP2A3Q93084 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 AL353705.2-201ENST00000428243 662 ntBASIC17.03■□□□□ 0.32
ATP2A3Q93084 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 HLA-A-202ENST00000376806 1854 ntBASIC17.03■□□□□ 0.32
ATP2A3Q93084 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A3Q93084 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A3Q93084 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC073439.1-201ENST00000624121 1774 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC007326.2-201ENST00000624224 7579 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC015922.1-201ENST00000421102 1152 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP2A3Q93084 SPTSSB-204ENST00000617024 1292 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 AF228730.6-201ENST00000641497 218 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC084121.3-201ENST00000641716 218 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 AC105233.6-201ENST00000642093 218 ntBASIC17.02■□□□□ 0.32
ATP2A3Q93084 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP2A3Q93084 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
ATP2A3Q93084 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A3Q93084 AC100757.3-201ENST00000622361 1406 ntBASIC17.02■□□□□ 0.31
ATP2A3Q93084 AC008741.2-201ENST00000612792 3115 ntBASIC17.02■□□□□ 0.31
ATP2A3Q93084 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.02■□□□□ 0.31
ATP2A3Q93084 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A3Q93084 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A3Q93084 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP2A3Q93084 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
ATP2A3Q93084 AL035456.1-201ENST00000456064 1369 ntBASIC17.02■□□□□ 0.31
ATP2A3Q93084 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 NORAD-201ENST00000565493 5339 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 FOXO1B-201ENST00000504678 1527 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A3Q93084 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 FAM220BP-201ENST00000377689 816 ntBASIC17.01■□□□□ 0.31
ATP2A3Q93084 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP2A3Q93084 AC004890.2-204ENST00000481968 304 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms