Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC092171.3-201ENST00000610122 2651 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 AL442647.2-201ENST00000429864 857 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 FAM86LP-201ENST00000478302 853 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 SNX29P1-201ENST00000548357 1007 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 MIR4259-201ENST00000584466 101 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 AC133539.2-201ENST00000604757 467 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 CU634019.7-201ENST00000624153 1185 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 FP236241.2-201ENST00000624906 1185 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 KRT8P22-201ENST00000562317 1415 ntBASIC14.91□□□□□ -0.02
CT55Q8WUE5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CT55Q8WUE5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CT55Q8WUE5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 AP001282.1-201ENST00000531301 1499 ntBASIC14.9□□□□□ -0.02
CT55Q8WUE5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 HAUS4P1-201ENST00000406739 1145 ntBASIC14.9□□□□□ -0.02
CT55Q8WUE5 KRT18P64-201ENST00000434946 1219 ntBASIC14.9□□□□□ -0.02
CT55Q8WUE5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 AL162726.2-201ENST00000438986 1017 ntBASIC14.9□□□□□ -0.02
CT55Q8WUE5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.9□□□□□ -0.02
CT55Q8WUE5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CT55Q8WUE5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms