Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 MSTO2P-201ENST00000314835 1709 ntBASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CARMIL3Q8ND23 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 POU5F1P6-201ENST00000466990 990 ntBASIC20■□□□□ 0.79
CARMIL3Q8ND23 RPL13AP25-201ENST00000484130 612 ntBASIC20■□□□□ 0.79
CARMIL3Q8ND23 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CARMIL3Q8ND23 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CARMIL3Q8ND23 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 BRWD1P1-201ENST00000401091 371 ntBASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 TOMM22P5-201ENST00000416399 439 ntBASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AP000812.2-201ENST00000538934 718 ntBASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AC009542.2-202ENST00000619004 1067 ntBASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 AL592424.1-201ENST00000563624 1536 ntBASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CARMIL3Q8ND23 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 AC134915.1-201ENST00000426461 574 ntBASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 AL355864.2-201ENST00000447420 863 ntBASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 AL049840.4-201ENST00000602422 811 ntBASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CARMIL3Q8ND23 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms