Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DOC2GP-204ENST00000639052 2548 ntBASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 TSSK5P-201ENST00000423978 907 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 HIST3H2BA-201ENST00000436555 524 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 RN7SL618P-201ENST00000477850 296 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 RNA5SP421-201ENST00000516864 134 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 AL033527.5-202ENST00000641632 1098 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 AC024909.3-201ENST00000611513 2257 ntBASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAM1L1Q8N609 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 REXO1L1P-202ENST00000608646 1974 ntBASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAM1L1Q8N609 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 AC112504.1-201ENST00000623415 1841 ntBASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAM1L1Q8N609 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms