Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 MIR6775-201ENST00000617557 69 ntBASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPOQ8N3V7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPOQ8N3V7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPOQ8N3V7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
SYNPOQ8N3V7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 AC010319.3-201ENST00000597028 470 ntBASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 UBALD1-205ENST00000590891 2641 ntBASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 Z97205.2-201ENST00000564697 1639 ntBASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 U82695.1-201ENST00000635752 1889 ntBASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPOQ8N3V7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 CYP4F24P-201ENST00000586049 1580 ntBASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 GGT4P-201ENST00000623672 1708 ntBASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNPOQ8N3V7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 AL645728.1-201ENST00000366221 2101 ntBASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPOQ8N3V7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms