Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 MED15P5-201ENST00000423150 992 ntBASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 KRT18P3-201ENST00000451602 1288 ntBASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 RNA5SP416-201ENST00000516838 111 ntBASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 AC106730.1-201ENST00000566722 1090 ntBASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 BX640515.1-201ENST00000617215 977 ntBASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC83Q8IWF9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AC136621.1-201ENST00000624017 2304 ntBASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 FOXO1B-201ENST00000504678 1527 ntBASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC83Q8IWF9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 AC112191.1-201ENST00000523689 701 ntBASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 RARRES2P8-201ENST00000566335 367 ntBASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 AC027601.4-201ENST00000611259 610 ntBASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC83Q8IWF9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms