Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC027601.5-201ENST00000624065 2482 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 COL6A4P2-202ENST00000504443 2753 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 AP002414.1-201ENST00000391405 1147 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 KLF4P1-201ENST00000412782 1185 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 LIN28AP1-201ENST00000429574 405 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 AC124864.1-201ENST00000623408 392 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 AP006294.2-201ENST00000641667 209 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 GPAA1P2-202ENST00000606848 1787 ntBASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LYSMD2Q8IV50 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD2Q8IV50 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD2Q8IV50 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms