Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 KRT16P4-201ENST00000453883 522 ntBASIC16.34■□□□□ 0.21
PACS2Q86VP3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.34■□□□□ 0.21
PACS2Q86VP3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.34■□□□□ 0.21
PACS2Q86VP3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PACS2Q86VP3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PACS2Q86VP3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PACS2Q86VP3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.33■□□□□ 0.21
PACS2Q86VP3 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.33■□□□□ 0.21
PACS2Q86VP3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.33■□□□□ 0.21
PACS2Q86VP3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PACS2Q86VP3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.33■□□□□ 0.21
PACS2Q86VP3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
PACS2Q86VP3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 AC111152.3-201ENST00000569699 673 ntBASIC16.33■□□□□ 0.2
PACS2Q86VP3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 AL034417.3-201ENST00000641100 1043 ntBASIC16.33■□□□□ 0.2
PACS2Q86VP3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PACS2Q86VP3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.33■□□□□ 0.2
PACS2Q86VP3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PACS2Q86VP3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PACS2Q86VP3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PACS2Q86VP3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACS2Q86VP3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.32■□□□□ 0.2
PACS2Q86VP3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms